Sequence Name:SollycM82_v1.0
Assembly Name | SollycM82_v1.0 | Biological Sample | cv. M82, LA3475 |
Number of Sequences | 1,237 | Number of Chromosomes | 2n = 2x = 24 |
Total Length (bp) | 829,074,230 | N50 Length (bp) | 66,835,077 |
Number of Genes | 35,695 | Number of Genes Source File | SollycM82_genes_v1.1.1.proteins.fasta.gz |
Number of Genes Annotated by Hayai-annotation | 0 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | PacBio Sequel II, Oxford Nanopore, Illumina, Hi-C | Read Depth | NA |
Assembly Method | Hifiasm v0.15, BWA-MEM v0.7.17, RagTag | Estimated Genome Size (Mb) | NA |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Sebastian Soyk (University of Lausanne) | Data Source | Sol Genomics Network |
DOI/PMID | 10.1186/s13059-022-02823-7 | Data Source URL | https://solgenomics.net/ |
BUSCO Version | 5.8.2 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.6%[S:97.6%,D:1.0%],F:0.8%,M:0.6%,n:1614 | BUSCO Gene (pep/cds) | C:90.3%[S:89.2%,D:1.1%],F:5.5%,M:4.2%,n:1614 |