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アセンブル , シーケンス , Assemble , Sequence , Solanum lycopersicum var. cerasiforme , Cherry tomato , ミニトマト, マメトマト (cerasiforme変種)

Solanum lycopersicum

Genome Assembly ID:t4081.G003

Sequence Name:SLYcer_r1.1

Details of the Assembled Genome Sequences

Assembly Name SLYcer_r1.1 Biological Sample var. cerasiforme, LA1673
Number of Sequences 14 Number of Chromosomes 2n = 2x = 24
Total Length (bp) 804,485,245 N50 Length (bp) 67,222,826
Number of Genes 75,230 Number of Genes Source File SLYcer_r1.1.pep.fasta
Number of Genes Annotated by Hayai-annotation 75,230 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio Read Depth 97x
Assembly Method Falcon_Unzip Estimated Genome Size (Mb) 770
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Tohru Ariizumi (University of Tsukuba) Data Source Plant GARDEN
DOI/PMID 10.1093/dnares/dsaa029 Data Source URL
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:97.6%[S:96.7%,D:0.9%],F:0.9%,M:1.5%,n:1614 BUSCO Gene (pep/cds) C:81.7%[S:80.5%,D:1.2%],F:7.5%,M:10.8%,n:1614

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