Sequence Name:SL4.0
Assembly Name | SL4.0 | Biological Sample | cv. Heinz 1706 |
Number of Sequences | 13 | Number of Chromosomes | 2n = 2x = 24 |
Total Length (bp) | 782,520,033 | N50 Length (bp) | 65,269,487 |
Number of Genes | 34,075 | Number of Genes Source File | ITAG4.0_proteins.fasta |
Number of Genes Annotated by Hayai-annotation | 34,075 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | PacBio, Illumina, Hi-C | Read Depth | 80x |
Assembly Method | Canu v1.5, Hi-C scaffolding, BioNano, 10X linked-read sequences | Estimated Genome Size (Mb) | 950 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Surya Saha (Boyce Thompson Institute) | Data Source | Sol Genomics Network |
DOI/PMID | 10.1101/767764 | Data Source URL | https://solgenomics.net/ |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:98.6%[S:98.0%,D:0.6%],F:0.5%,M:0.9%,n:1614 | BUSCO Gene (pep/cds) | C:91.5%[S:90.4%,D:1.1%],F:5.3%,M:3.2%,n:1614 |