Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc12g015710.2.1 |
| PEP | Solyc12g015710.2.1 |
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| Position on the Genome | Chromosome | SL3.0ch12 | |
| Start Position | 5687004 | ||
| End Position | 5696010 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00780264 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | RNA (C5-cytosine) methyltransferase |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | 16S rRNA m5C967 methyltransferase |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | |||
| KO ID | |||
| Pfam ID | PF01029,PF01189 |
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| Pfam Description | Details | ||
| InterPro ID | IPR006027,IPR023267,IPR004573,IPR029063,IPR035926,IPR001678,IPR023268 |
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| InterPro Description | Details | ||
| GO ID | GO:0005730,GO:0003723,GO:0070475,GO:0009383,GO:0000470,GO:0006355,GO:0001510,GO:0005737 |
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| GO Description | Details | ||
| GOslim ID | GO:0043412,GO:0003676,GO:0006351,GO:0016070,GO:0042254,GO:0006396,GO:0005730,GO:0050789,GO:0005737,GO:0016740 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
