Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc10g081020.2.1 |
| PEP | Solyc10g081020.2.1 |
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| Position on the Genome | Chromosome | SL3.0ch10 | |
| Start Position | 62324464 | ||
| End Position | 62334532 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00498227 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Transcription elongation factor spt6 |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | Transcription elongation factor spt6 |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
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| KEGG entry | |||
| KO ID | |||
| Pfam ID | PF14633,PF14635,PF14632,PF14639,PF17674 |
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| Pfam Description | Details | ||
| InterPro ID | IPR042066,IPR028231,IPR032706,IPR041692,IPR023323,IPR035420,IPR028083,IPR010994,IPR035019,IPR022967,IPR035018,IPR036860,IPR003029,IPR037027,IPR012337,IPR006641,IPR012340,IPR017072,IPR023319 |
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| InterPro Description | Details | ||
| GO ID | GO:0003676,GO:0031491,GO:0050684,GO:0042789,GO:0032968,GO:0034728,GO:0035327,GO:0070827,GO:0006368,GO:0008023,GO:0042393 |
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| GO Description | Details | ||
| GOslim ID | GO:0003682,GO:0006396,GO:0008023,GO:0005694,GO:0050789,GO:0051276,GO:0006354,GO:0006351,GO:0005515,GO:0003676 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
