Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc10g080350.2.1 |
| PEP | Solyc10g080350.2.1 |
||
| Position on the Genome | Chromosome | SL3.0ch10 | |
| Start Position | 61752091 | ||
| End Position | 61783145 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI01893244 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
||
| OrthoDB | Database version | 10.1 | |
| Description | RNA polymerase Rpb1, domain 4 |
||
| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | DNA-directed RNA polymerase subunit |
||
| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | |||
| KO ID | |||
| Pfam ID | PF00623,PF04998,PF04983,PF04997,PF05000 |
||
| Pfam Description | Details | ||
| InterPro ID | IPR000722,IPR015699,IPR007080,IPR042102,IPR006592,IPR038120,IPR007066,IPR007083,IPR007081 |
||
| InterPro Description | Details | ||
| GO ID | GO:0008270,GO:0006351,GO:0003677,GO:0005736,GO:0003899 |
||
| GO Description | Details | ||
| GOslim ID | GO:0009059,GO:0006351,GO:0043167,GO:0030880,GO:0003676,GO:0016740,GO:0005730,GO:0016070 |
||
| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
||
| TF family Description | NA |
||
| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
