Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc09g064660.3.1 |
| PEP | Solyc09g064660.3.1 |
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| Position on the Genome | Chromosome | SL3.0ch09 | |
| Start Position | 62206838 | ||
| End Position | 62214579 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI03353473 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | LSM domain, eukaryotic/archaea-type |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | Small nuclear ribonucleoprotein Sm D1 |
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| Accession | |||
| CrossRef Refseq from UniProt | NA |
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| EC | NA |
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| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF01423 |
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| Pfam Description | Details | ||
| InterPro ID | IPR027141,IPR001163,IPR010920,IPR034102 |
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| InterPro Description | Details | ||
| GO ID | GO:0034715,GO:0034719,GO:0000387,GO:0071011,GO:0005687,GO:0005686,GO:0005685,GO:0003723,GO:0005689,GO:0000243,GO:0005682,GO:0097526,GO:0071013 |
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| GO Description | Details | ||
| GOslim ID | GO:0030532,GO:0005681,GO:0005737,GO:0032991,GO:0003676,GO:0000375,GO:0065003 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
