Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc09g055260.3.1 |
| PEP | Solyc09g055260.3.1 |
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| Position on the Genome | Chromosome | SL3.0ch09 | |
| Start Position | 38591081 | ||
| End Position | 38607522 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI02970318 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Zinc finger, RING-type |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | E3 ubiquitin-protein ligase listerin |
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| Accession | |||
| CrossRef Refseq from UniProt | NA |
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| EC | |||
| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF13639 |
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| Pfam Description | Details | ||
| InterPro ID | IPR016024,IPR011016,IPR039795,IPR039804,IPR013083,IPR001841 |
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| InterPro Description | Details | ||
| GO ID | GO:1990112,GO:0072344,GO:1990116,GO:0005829,GO:0043161,GO:0043023,GO:0061630,GO:0008270 |
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| GO Description | Details | ||
| GOslim ID | GO:0006508,GO:0043167,GO:0019787,GO:0006464,GO:0043021,GO:0005737,GO:0009057,GO:0050789,GO:0032991 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
