Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc09g020130.3.1 |
| PEP | Solyc09g020130.3.1 |
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| Position on the Genome | Chromosome | SL3.0ch09 | |
| Start Position | 18628440 | ||
| End Position | 18631493 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KPRO01379835 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Ribosomal protein L5 eukaryotic/L18 archaeal |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | refseq |
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| Protein name | 60S ribosomal protein L5 |
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| Accession | |||
| CrossRef Refseq from UniProt | NA |
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| EC | NA |
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| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF17144,PF14204 |
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| Pfam Description | Details | ||
| InterPro ID | IPR025607,IPR005485 |
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| InterPro Description | Details | ||
| GO ID | GO:0005840,GO:0006412,GO:0003735,GO:0005622,GO:0008097 |
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| GO Description | Details | ||
| GOslim ID | GO:0005198,GO:0005840,GO:0005575,GO:0003676 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | The gene has stop codons in the middle of the protein sequence | ||
