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Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc08g077790.3.1
PEP
Solyc08g077790.3.1
Position on the Genome Chromosome SL3.0ch08
Start Position 61822770
End Position 61828100
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01365665
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Peptidylprolyl isomerase
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00160
Pfam Description Details
InterPro ID
IPR029000,IPR002130
InterPro Description Details
GO ID
GO:0003755,GO:0016021
GO Description Details
GOslim ID
GO:0016020,GO:0006464,GO:0016853
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.