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Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc08g077090.3.1
PEP
Solyc08g077090.3.1
Position on the Genome Chromosome SL3.0ch08
Start Position 61138916
End Position 61144345
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00782267
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
EYA domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Protein-tyrosine-phosphatase
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
Pfam ID
NA
Pfam Description
InterPro ID
IPR006545,IPR028472,IPR038102,IPR036412
InterPro Description Details
GO ID
GO:0007275,GO:0030154,GO:0004725,GO:0046872,GO:0045739,GO:0005634,GO:0016576,GO:0048856
GO Description Details
GOslim ID
GO:0006464,GO:0032502,GO:0006793,GO:0051276,GO:0050789,GO:0005634,GO:0006281,GO:0043167,GO:0032501,GO:0016787
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.