Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc08g065970.3.1 |
| PEP | Solyc08g065970.3.1 |
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| Position on the Genome | Chromosome | SL3.0ch08 | |
| Start Position | 54433246 | ||
| End Position | 54438717 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00822428 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | RNA polymerase sigma-70 region 2 |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | RNA_pol_sigma70 domain-containing protein |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
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| KEGG entry | |||
| KO ID | |||
| Pfam ID | PF04545,PF04542,PF04539 |
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| Pfam Description | Details | ||
| InterPro ID | IPR013325,IPR007624,IPR013324,IPR007630,IPR000943,IPR007627,IPR014284,IPR036388 |
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| InterPro Description | Details | ||
| GO ID | GO:0003700,GO:0003677,GO:0006352,GO:0016987 |
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| GO Description | Details | ||
| GOslim ID | GO:0003676,GO:0006351,GO:0065009,GO:0050789,GO:0005515 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
