Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc07g056570.1.1 |
| PEP | Solyc07g056570.1.1 |
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| Position on the Genome | Chromosome | SL3.0ch07 | |
| Start Position | 64491941 | ||
| End Position | 64493758 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00371403 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Carotenoid oxygenase |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | swissprot |
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| Protein name | 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | |||
| KO ID | |||
| Pfam ID | PF03055 |
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| Pfam Description | Details | ||
| InterPro ID | IPR004294 |
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| InterPro Description | Details | ||
| GO ID | GO:0009739,GO:0009738,GO:0009733,GO:0009737,GO:1901177,GO:0009555,GO:0009751,GO:0010436,GO:0009835,GO:0009856,GO:0016121,GO:1901812,GO:0009507,GO:0045549,GO:0016123,GO:0009414,GO:0009570,GO:0009651,GO:0046872,GO:0009688,GO:0048653 |
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| GO Description | Details | ||
| GOslim ID | GO:0050896,GO:0006066,GO:0007154,GO:0032501,GO:0043167,GO:0044255,GO:0000003,GO:0009536,GO:0050789,GO:0032502,GO:0042440,GO:0006082,GO:0051213,GO:0051704 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
