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Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc07g052980.3.1
PEP
Solyc07g052980.3.1
Position on the Genome Chromosome SL3.0ch07
Start Position 61528033
End Position 61529822
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00563999
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Xyloglucan endotransglucosylase/hydrolase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Xyloglucan endotransglucosylase/hydrolase
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
Pfam ID
PF00722,PF06955
Pfam Description Details
InterPro ID
IPR000757,IPR008264,IPR016455,IPR010713,IPR013320
InterPro Description Details
GO ID
GO:0010411,GO:0005618,GO:0048046,GO:0071555,GO:0016762,GO:0004553,GO:0042546
GO Description Details
GOslim ID
GO:0044085,GO:0005618,GO:0071555,GO:0005576,GO:0016740,GO:0005976,GO:0016787
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.