Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc06g071300.1.1 |
| PEP | Solyc06g071300.1.1 |
||
| Position on the Genome | Chromosome | SL3.0ch06 | |
| Start Position | 44019741 | ||
| End Position | 44020133 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI01692359 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
||
| OrthoDB | Database version | 10.1 | |
| Description | Transcription factor, MADS-box |
||
| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | SRF-type transcription factor family protein |
||
| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
||
| KEGG entry | NA |
||
| KO ID | NA |
||
| Pfam ID | PF00319 |
||
| Pfam Description | Details | ||
| InterPro ID | IPR002100,IPR036879 |
||
| InterPro Description | Details | ||
| GO ID | GO:0000981,GO:0008134,GO:0000976,GO:0005634,GO:0000977,GO:0046983,GO:0043565 |
||
| GO Description | Details | ||
| GOslim ID | GO:0003676,GO:0005694,GO:0050789,GO:0005634,GO:0065009,GO:0005515,GO:0006351 |
||
| GO slim Description | Details | ||
| Transcription Factor (TF) family | |||
| TF family Description | M-type_MADS family protein |
||
| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
