Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc06g008860.3.1 |
| PEP | Solyc06g008860.3.1 |
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| Position on the Genome | Chromosome | SL3.0ch06 | |
| Start Position | 2799886 | ||
| End Position | 2804822 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00312351 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | U1 small nuclear ribonucleoprotein C |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | U1 small nuclear ribonucleoprotein C |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
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| KEGG entry | |||
| KO ID | |||
| Pfam ID | PF06220 |
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| Pfam Description | Details | ||
| InterPro ID | IPR013085,IPR003604,IPR036236,IPR000690,IPR017340 |
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| InterPro Description | Details | ||
| GO ID | GO:0071004,GO:0003729,GO:0005685,GO:0000395,GO:0000387,GO:0008270,GO:0030627,GO:0000243,GO:0030619 |
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| GO Description | Details | ||
| GOslim ID | GO:0030532,GO:0003676,GO:0065003,GO:0000375,GO:0005681,GO:0043167 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
