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Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc05g012090.3.1
PEP
Solyc05g012090.3.1
Position on the Genome Chromosome SL3.0ch05
Start Position 5307947
End Position 5311714
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00688541
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF01288,PF00809
Pfam Description Details
InterPro ID
IPR006390,IPR035907,IPR011005,IPR000550,IPR000489
InterPro Description Details
GO ID
GO:0003848,GO:0004156,GO:0046654,GO:0046656,GO:0016301,GO:0005524,GO:0046872
GO Description Details
GOslim ID
GO:0006766,GO:0006082,GO:0016740,GO:0046483,GO:0043603,GO:0006725,GO:0043167,GO:0006793,GO:0000166
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.