Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc05g006680.3.1 |
| PEP | Solyc05g006680.3.1 |
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| Position on the Genome | Chromosome | SL3.0ch05 | |
| Start Position | 1357313 | ||
| End Position | 1361215 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KPRO00104547 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Galectin, carbohydrate recognition domain |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | refseq |
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| Protein name | hydroxyproline O-galactosyltransferase GALT6-like |
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| Accession | |||
| CrossRef Refseq from UniProt | NA |
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| EC | NA |
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| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF01762,PF00337 |
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| Pfam Description | Details | ||
| InterPro ID | IPR001079,IPR002659 |
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| InterPro Description | Details | ||
| GO ID | GO:0008378,GO:0016020,GO:0006486,GO:0030246 |
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| GO Description | Details | ||
| GOslim ID | GO:0030246,GO:0016740,GO:0006464,GO:0009059,GO:0016020 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | The gene has stop codons in the middle of the protein sequence | ||
