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Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc05g006640.3.1
PEP
Solyc05g006640.3.1
Position on the Genome Chromosome SL3.0ch05
Start Position 1293307
End Position 1303794
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI02418410
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
P-type ATPase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Phospholipid-transporting ATPase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF16212
Pfam Description Details
InterPro ID
IPR023214,IPR006539,IPR036412,IPR032630,IPR001757,IPR023299,IPR018303,IPR023298
InterPro Description Details
GO ID
GO:0045332,GO:0000287,GO:0005886,GO:0005802,GO:0016021,GO:0140326,GO:0000139,GO:0048194,GO:0005524
GO Description Details
GOslim ID
GO:0016050,GO:0065008,GO:0043167,GO:0006869,GO:0061024,GO:0006811,GO:0016192,GO:0016787,GO:0005794,GO:0016020,GO:0005215,GO:0000166
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.