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Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc04g074480.3.1
PEP
Solyc04g074480.3.1
Position on the Genome Chromosome SL3.0ch04
Start Position 60554256
End Position 60557892
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00155136
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Phospho-2-dehydro-3-deoxyheptonate aldolase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Phospho-2-dehydro-3-deoxyheptonate aldolase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF01474
Pfam Description Details
InterPro ID
IPR002480,IPR013785
InterPro Description Details
GO ID
GO:0003849,GO:0009073,GO:0009507,GO:0009423
GO Description Details
GOslim ID
GO:0006725,GO:0006082,GO:0009536,GO:0006520,GO:0016740
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.