Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc04g057940.3.1 |
| PEP | Solyc04g057940.3.1 |
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| Position on the Genome | Chromosome | SL3.0ch04 | |
| Start Position | 54993733 | ||
| End Position | 55000895 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI04070078 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | RING-type E3 ubiquitin transferase |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | RING-type E3 ubiquitin transferase |
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| Accession | |||
| CrossRef Refseq from UniProt | NA |
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| EC | |||
| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF04564,PF00400 |
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| Pfam Description | Details | ||
| InterPro ID | IPR003613,IPR001680,IPR036322,IPR011989,IPR017986,IPR015943,IPR013083,IPR016024,IPR019775 |
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| InterPro Description | Details | ||
| GO ID | GO:0006364,GO:0003723,GO:0004842,GO:0005829 |
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| GO Description | Details | ||
| GOslim ID | GO:0006396,GO:0003676,GO:0019787,GO:0006464,GO:0005737,GO:0042254 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
