Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc04g049010.3.1 |
| PEP | Solyc04g049010.3.1 |
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| Position on the Genome | Chromosome | SL3.0ch04 | |
| Start Position | 39105433 | ||
| End Position | 39147113 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI01369734 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | 5'-3' exoribonuclease |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | 5-3 exoribonuclease |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | |||
| KO ID | |||
| Pfam ID | PF17846,PF03159 |
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| Pfam Description | Details | ||
| InterPro ID | IPR041412,IPR001878,IPR017151,IPR027073,IPR004859 |
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| InterPro Description | Details | ||
| GO ID | GO:0000956,GO:0010587,GO:0005844,GO:0009826,GO:0004534,GO:0003729,GO:0031087,GO:0010087,GO:0006397,GO:0008270,GO:0010494,GO:0070370,GO:0003723,GO:0000291,GO:0005829,GO:0005634,GO:0051301,GO:0000932,GO:0040029 |
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| GO Description | Details | ||
| GOslim ID | GO:0009057,GO:0050789,GO:0016070,GO:0043170,GO:0016787,GO:0050896,GO:0006396,GO:0051301,GO:0003676,GO:0005844,GO:0005737,GO:0032502,GO:0043232,GO:0043167,GO:0016049,GO:0005634 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
