Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc04g014210.3.1 |
| PEP | Solyc04g014210.3.1 |
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| Position on the Genome | Chromosome | SL3.0ch04 | |
| Start Position | 4509404 | ||
| End Position | 4517860 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00557916 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Zinc finger, RING-type |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | RNA helicase |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | |||
| KO ID | |||
| Pfam ID | PF01485,PF00271,PF07717,PF00270,PF04408 |
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| Pfam Description | Details | ||
| InterPro ID | IPR027417,IPR013087,IPR007502,IPR036612,IPR002464,IPR011545,IPR044066,IPR001841,IPR013083,IPR001650,IPR014001,IPR017907,IPR042035,IPR011709,IPR035979,IPR002867 |
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| InterPro Description | Details | ||
| GO ID | GO:0046872,GO:0005524,GO:0003724,GO:0003723 |
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| GO Description | Details | ||
| GOslim ID | GO:0000166,GO:0003676,GO:0043167,GO:0004386 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
