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Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc04g009520.3.1
PEP
Solyc04g009520.3.1
Position on the Genome Chromosome SL3.0ch04
Start Position 2938732
End Position 2942289
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KPRO00117135
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Transcription factor CBF/NF-Y/archaeal histone domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
refseq
Protein name
nuclear transcription factor Y subunit B-10
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00808
Pfam Description Details
InterPro ID
IPR003958
InterPro Description Details
GO ID
NA
GO Description
GOslim ID
NA
GO slim Description
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.