Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc03g097290.3.1 |
| PEP | Solyc03g097290.3.1 |
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| Position on the Genome | Chromosome | SL3.0ch03 | |
| Start Position | 61047782 | ||
| End Position | 61061355 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI02211528 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Alanine--tRNA ligase |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | Alanine--tRNA ligase |
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| Accession | |||
| CrossRef Refseq from UniProt | NA |
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| EC | |||
| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF01411,PF07973,PF02272 |
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| Pfam Description | Details | ||
| InterPro ID | IPR023033,IPR003156,IPR009000,IPR002318,IPR018165,IPR018162,IPR018163,IPR012947,IPR018164 |
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| InterPro Description | Details | ||
| GO ID | GO:0000049,GO:0009507,GO:0006419,GO:0004813,GO:0002161,GO:0016597,GO:0006400,GO:0005739,GO:0005524,GO:0070143,GO:0005829,GO:0008270 |
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| GO Description | Details | ||
| GOslim ID | GO:0016787,GO:0065008,GO:0043167,GO:0005737,GO:0016070,GO:0009536,GO:0016874,GO:0006520,GO:0000166,GO:0043412,GO:0005739,GO:0006396,GO:0016597,GO:0003676 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
