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Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc03g080080.3.1
PEP
Solyc03g080080.3.1
Position on the Genome Chromosome SL3.0ch03
Start Position 53409877
End Position 53414165
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI04713016
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
EF-hand domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Endo/exonuclease/phosphatase domain-containing protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF03372
Pfam Description Details
InterPro ID
IPR005135,IPR036691,IPR011992,IPR018247
InterPro Description Details
GO ID
GO:0000175
GO Description Details
GOslim ID
GO:0016787,GO:0016070
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.