Plant GARDEN How To ▶︎

JA

EN

Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc03g007980.1.1
PEP
Solyc03g007980.1.1
Position on the Genome Chromosome SL3.0ch03
Start Position 2465111
End Position 2466106
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00269710
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
CobQ/CobB/MinD/ParA nucleotide binding domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
CbiA domain-containing protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
Pfam ID
PF01656
Pfam Description Details
InterPro ID
IPR010223,IPR002586,IPR027417
InterPro Description Details
GO ID
GO:0005524,GO:0009898,GO:0016887,GO:0005829,GO:0005886,GO:0051782
GO Description Details
GOslim ID
GO:0016787,GO:0043167,GO:0005737,GO:0051301,GO:0000166,GO:0016020,GO:0050789
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.