Plant GARDEN How To ▶︎

JA

EN

Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc02g086800.3.1
PEP
Solyc02g086800.3.1
Position on the Genome Chromosome SL3.0ch02
Start Position 50051992
End Position 50061116
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00482435
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
P-type ATPase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Phospholipid-transporting ATPase
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
Pfam ID
PF16209,PF16212
Pfam Description Details
InterPro ID
IPR032631,IPR018303,IPR032630,IPR008250,IPR001757,IPR023298,IPR023299,IPR036412,IPR006539,IPR023214
InterPro Description Details
GO ID
GO:0005524,GO:0016021,GO:0005886,GO:0000287,GO:0140326,GO:0045332
GO Description Details
GOslim ID
GO:0043167,GO:0006811,GO:0065008,GO:0016020,GO:0061024,GO:0006869,GO:0000166,GO:0005215,GO:0016787
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.