Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc02g085240.3.1 |
| PEP | Solyc02g085240.3.1 |
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| Position on the Genome | Chromosome | SL3.0ch02 | |
| Start Position | 48845360 | ||
| End Position | 48847600 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI01962503 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | AP complex subunit sigma |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | AP complex subunit sigma |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
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| KEGG entry | |||
| KO ID | |||
| Pfam ID | PF01217 |
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| Pfam Description | Details | ||
| InterPro ID | IPR000804,IPR022775,IPR011012,IPR016635 |
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| InterPro Description | Details | ||
| GO ID | GO:0043231,GO:0016192,GO:0006886,GO:0030117 |
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| GO Description | Details | ||
| GOslim ID | GO:0051641,GO:0005737,GO:0016192,GO:0016020,GO:0005575,GO:0032991,GO:0015031,GO:0043231 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
