Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc02g081910.2.1 |
| PEP | Solyc02g081910.2.1 |
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| Position on the Genome | Chromosome | SL3.0ch02 | |
| Start Position | 46225612 | ||
| End Position | 46237051 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00310274 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | DNA topoisomerase, type IA |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | Omega-protein |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF01396,PF01751,PF01131,PF13368 |
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| Pfam Description | Details | ||
| InterPro ID | IPR025589,IPR000380,IPR013825,IPR005733,IPR003602,IPR013497,IPR013498,IPR006171,IPR028612,IPR013824,IPR013826,IPR034149,IPR023405,IPR003601,IPR023406 |
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| InterPro Description | Details | ||
| GO ID | GO:0046872,GO:0003677,GO:0003917,GO:0006265,GO:0005694 |
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| GO Description | Details | ||
| GOslim ID | GO:0043167,GO:0051276,GO:0003676,GO:0005694,GO:0006259,GO:0016853 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
