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Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc02g080070.3.1
PEP
Solyc02g080070.3.1
Position on the Genome Chromosome SL3.0ch02
Start Position 44937394
End Position 44941612
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KPRO01527698
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Gnk2-homologous domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
refseq
Protein name
putative receptor-like protein kinase At4g00960
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF07714,PF01657
Pfam Description Details
InterPro ID
IPR002902,IPR001245
InterPro Description Details
GO ID
GO:0004672,GO:0006468
GO Description Details
GOslim ID
GO:0016740,GO:0006464,GO:0006793
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
putative receptor-like protein kinase At4g00960
OrthoDB(1 item)
29789at33090
Gnk2-homologous domain
Pfam(2 items)
 
Protein tyrosine kinase
 
Salt stress response/antifungal
InterPro(2 items)
 
Gnk2-homologous domain
 
Serine-threonine/tyrosine-protein kinase, catalytic domain
Gene ontology(2 items)
MF
protein kinase activity
BP
protein phosphorylation
GO slim(3 items)
MF
transferase activity
BP
cellular protein modification process
BP
phosphorus metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.