Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc01g101010.3.1 |
| PEP | Solyc01g101010.3.1 |
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| Position on the Genome | Chromosome | SL3.0ch01 | |
| Start Position | 90752582 | ||
| End Position | 90761484 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00408413 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Rtr1/RPAP2 domain |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF04181 |
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| Pfam Description | Details | ||
| InterPro ID | IPR038534,IPR039693,IPR007308 |
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| InterPro Description | Details | ||
| GO ID | GO:0005737,GO:0043175,GO:0046872,GO:0070940,GO:0005634,GO:0008420 |
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| GO Description | Details | ||
| GOslim ID | GO:0006351,GO:0050789,GO:0005634,GO:0006464,GO:0006793,GO:0005515,GO:0005737,GO:0016787,GO:0043167 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
