Solanum lycopersicumAssembly Name:SL3.00
Gene File:ITAG3.2_proteins.fasta.gz
| Position on the Genome | Gene Name | CDS | Solyc01g087500.3.1 |
| PEP | Solyc01g087500.3.1 |
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| Position on the Genome | Chromosome | SL3.0ch01 | |
| Start Position | 82315373 | ||
| End Position | 82327626 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00627364 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | DNA topoisomerase, type IIA |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | DNA topoisomerase 2 |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF02518,PF01751,PF00521,PF00204,PF16898 |
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| Pfam Description | Details | ||
| InterPro ID | IPR013760,IPR018522,IPR013758,IPR003594,IPR036890,IPR013757,IPR002205,IPR013759,IPR013506,IPR001241,IPR020568,IPR031660,IPR014721,IPR006171,IPR034157 |
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| InterPro Description | Details | ||
| GO ID | GO:0000819,GO:0006265,GO:0044774,GO:0046872,GO:0003918,GO:0005524,GO:0003677,GO:0000712,GO:0005634 |
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| GO Description | Details | ||
| GOslim ID | GO:0016853,GO:0005634,GO:0007059,GO:0051276,GO:0007049,GO:0000280,GO:0000166,GO:0050789,GO:0006259,GO:0043167,GO:0016787,GO:0003676,GO:0000003 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum lycopersicum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
