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Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc01g080860.3.1
PEP
Solyc01g080860.3.1
Position on the Genome Chromosome SL3.0ch01
Start Position 80030118
End Position 80039227
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01017318
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Protohaem IX farnesyltransferase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Heme O synthase
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
Pfam ID
PF01040
Pfam Description Details
InterPro ID
IPR000537,IPR006369
InterPro Description Details
GO ID
GO:0016021,GO:0004311,GO:0045333,GO:0048034,GO:0006783,GO:0008495,GO:0005739
GO Description Details
GOslim ID
GO:0046483,GO:0042440,GO:0016740,GO:0005739,GO:0006725,GO:0045333,GO:0006807,GO:0016020
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.