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Solanum lycopersicum

Assembly Name:SL3.00

Gene File:ITAG3.2_proteins.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Solyc00g027770.3.1
PEP
Solyc00g027770.3.1
Position on the Genome Chromosome SL3.0ch00
Start Position 11477331
End Position 11483279
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KPRO01394937
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq
OrthoDB Database version 10.1
Description
Pectinesterase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
refseq
Protein name
pectinesterase 31
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF01095
Pfam Description Details
InterPro ID
IPR000070
InterPro Description Details
GO ID
GO:0030599,GO:0005618,GO:0042545
GO Description Details
GOslim ID
GO:0005618,GO:0016787,GO:0071555
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum lycopersicum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , cv. Heinz 1706 , Solanaceae , ナス科 , Solanum , ナス属 , Tomato, Cherry tomato , トマト, ミニトマト, マメトマト Tomato , トマト

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.