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アセンブル , シーケンス , Assemble , Sequence , Datura stramonium , Jimson weed, Common thornapple , ヨウシュチョウセンアサガオ

Datura stramonium

Genome Assembly ID:t4076.G001

Sequence Name:UCR_Dstr_1.4

Details of the Assembled Genome Sequences

Assembly Name UCR_Dstr_1.4 Biological Sample NA
Number of Sequences 232,580 Number of Chromosomes 2n = 2x = 24
Total Length (bp) 2,110,457,301 N50 Length (bp) 164,097
Number of Genes 52,106 Number of Genes Source File GCA_018107945.1_UCR_Dstr_1.4_protein.faa
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method llumina, Nanopore MinION Read Depth 90.0x
Assembly Method ABySS v. 2.0.2 Estimated Genome Size (Mb) 2,000
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Amy Litt (University of California) Data Source NCBI
DOI/PMID 10.1186/s12864-021-07489-2 Data Source URL https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/107/945/GCA_018107945.1_UCR_Dstr_1.4/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:96.6%[S:94.9%,D:1.7%],F:2.1%,M:1.3%,n:1614 BUSCO Gene (pep/cds) C:85.6%[S:84.1%,D:1.5%],F:9.6%,M:4.8%,n:1614

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

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