Plant GARDEN How To ▶︎

JA

EN

アセンブル , シーケンス , Assemble , Sequence , Calotropis gigantea , Tring hemp, Madar , カイガンタバコ

Calotropis gigantea

Genome Assembly ID:t4066.G001

Sequence Name:CAL_genome_asm_v2.2_1000_rmscaff

Details of the Assembled Genome Sequences

Assembly Name CAL_genome_asm_v2.2_1000_rmscaff Biological Sample NA
Number of Sequences 1,536 Number of Chromosomes 2n = 2x = 22
Total Length (bp) 157,284,427 N50 Length (bp) 805,959
Number of Genes 18,197 Number of Genes Source File cal_hc_gene_models.rmscaff.repr.pep.fa.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina Read Depth 193x
Assembly Method ALLPATHS-LG Estimated Genome Size (Mb) 225
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author C Robin Buell (Michigan State University) Data Source DRYAD
DOI/PMID 10.1534/g3.117.300331 Data Source URL https://datadryad.org
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

Search Genes

Gene data has not been registered.

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format