Plant GARDEN How To ▶︎

JA

EN

アセンブル , シーケンス , Assemble , Sequence , Phaseolus vulgaris , Green bean , インゲンマメ

Phaseolus vulgaris

Genome Assembly ID:t3885.G001

Sequence Name:PhaVulg1_0

Details of the Assembled Genome Sequences

Assembly Name PhaVulg1_0 Biological Sample G19833
Number of Sequences 708 Number of Chromosomes 2n = 2x = 22
Total Length (bp) 521,076,696 N50 Length (bp) 50,367,376
Number of Genes 32,720 Number of Genes Source File Phaseolus_vulgaris.PhaVulg1_0.pep.all.fa
Number of Genes Annotated by Hayai-annotation 32,720 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, 454, ABI3730 Read Depth 18.6x
Assembly Method ARACHNE v. 20071016_modfied Estimated Genome Size (Mb) 587
Sequencing Method Comments NA Comments An inbred landrace line
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Scott A Jackson (University of Georgia), Jeremy Schmutz (US Department of Energy Joint Genome Institute), Phillip E McClean (North Dakota State University) Data Source Ensembl
DOI/PMID 10.1038/ng.3008 Data Source URL http://plants.ensembl.org/index.html
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:98.7%[S:96.4%,D:2.3%],F:0.6%,M:0.7%,n:1614 BUSCO Gene (pep/cds) C:96.5%[S:82.3%,D:14.2%],F:2.9%,M:0.6%,n:1614

Search Genes

Cut-Out Genome Sequences

Chromosome /
Scaffolds
Start Position
End Position
Complementary Strand
fasta
format