Phaseolus vulgaris| Assembly Name | Biological Sample | Assembly Level | Annotation (gff / gff3) |
Gene (cds / gene) |
Hayai Annotation ZEN |
Transcripts (cDNA / mRNA) |
Amino Acid (pep / aa) |
Download | JBrowse | Comments |
|---|---|---|---|---|---|---|---|---|---|---|
G19833 |
Chromosome |
● |
● |
● |
● |
● |
|
|
An inbred landrace line |
Sequence Type |
Biological Sample | Sequence Name | Accession | JBrowse | Comments | |||
|---|---|---|---|---|---|---|---|---|
PhaVulg1_0 |
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Whole Genome Sequence (Short Read) |
G19833 |
|
Sample Number:4086776 |
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Whole Genome Sequence (Short Read) |
AFR 298 |
|
population:Andean; genotype:AFR 298; phenotype:Drought tolerance; seed_size:Large; growth_habit:Bush; eco_zone:Mid-altitude |
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Whole Genome Sequence (Short Read) |
AND 696 |
|
population:Andean; genotype:AND 696; seed_size:Large; growth_habit:Bush; eco_zone:Highlands |
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Whole Genome Sequence (Short Read) |
G5686 |
|
population:Andean; genotype:G5686; phenotype:ALS resistance; seed_size:Large; growth_habit:Bush; eco_zone:Highlands |
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Whole Genome Sequence (Short Read) |
MD 23-24 |
|
population:Mesoamerican; genotype:MD 23-24; seed_size:Small; growth_habit:Bush-Indeterminate; eco_zone:Low altitude and dry;common_name:Bribri |
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Whole Genome Sequence (Short Read) |
SEA 5 |
|
population:Mesoamerican; genotype:SEA 5; phenotype:Drought tolerance; seed_size:Small; growth_habit:Prostrate-Indeterminate; eco_zone:Low altitude and dry |
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Whole Genome Sequence (Short Read) |
VAX 1 |
|
population:Mesoamerican; genotype:VAX 1; phenotype:CBB resistance; seed_size:Medium; growth_habit:Prostrate-Indeterminate; eco_zone:Low altitude and dry |
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Whole Genome Sequence (Short Read) |
G10474 |
|
population:Mesoamerican; genotype:G10474; phenotype:ALS resistance; seed_size:Medium; growth_habit:Climbing; eco_zone:High altitude and dry; common_name:Guatemala 889 |
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Whole Genome Sequence (Short Read) |
race 6 |
|
race 6 pool |
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Whole Genome Sequence (Short Read) |
race 4 |
|
race 4 |
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Whole Genome Sequence (Short Read) |
race 4 |
|
race 4 pool |
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Whole Genome Sequence (Short Read) |
MEXICO_54 |
|
population:Mesoamerican; grain_type:Creme-beige - Bayo |
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Whole Genome Sequence (Short Read) |
VAX_6 |
|
population:Mesoamerican; grain_type:Red |
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Whole Genome Sequence (Short Read) |
VAX_3 |
|
population:Mesoamerican; grain_type:Red |
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Whole Genome Sequence (Short Read) |
KABLANKETI |
|
population:Andean; grain_type:Gray purple mottled |
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Whole Genome Sequence (Short Read) |
RED_WOLAYTA |
|
population:Mesoamerican; grain_type:Dark red kidney |
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Whole Genome Sequence (Short Read) |
MSHINDI |
|
population:Mesoamerican |
|||||
Whole Genome Sequence (Short Read) |
G2333 |
|
population:Mesoamerican; grain_type:Red |
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Whole Genome Sequence (Short Read) |
TARS-VR-7S |
|
population:Mesoamerican; grain_type:Navy |
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Whole Genome Sequence (Short Read) |
NABE_13 |
|
population:Andean; grain_type:Red |
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Whole Genome Sequence (Short Read) |
G24705 |
|
population:Andean; grain_type:Yellow/red |
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Whole Genome Sequence (Short Read) |
NABE_14 |
|
population:Andean; grain_type:Bright light red |
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Whole Genome Sequence (Short Read) |
RWR_719 |
|
population:Mesoamerican; grain_type:Small red |
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Whole Genome Sequence (Short Read) |
VAX_4 |
|
population:Mesoamerican; grain_type:Cream |
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Whole Genome Sequence (Short Read) |
Midas |
|
population:Andean; grain_type:White |
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Whole Genome Sequence (Short Read) |
NABE_12C |
|
population:Andean; grain_type:Deep cream with maroon bands |
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Whole Genome Sequence (Short Read) |
G4627 |
|
population:Andean; grain_type:Purple opaque |
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Whole Genome Sequence (Short Read) |
G0750 |
|
population:Mesoamerican; grain_type:Black |
|||||
Whole Genome Sequence (Short Read) |
IBADDO |
|
population:Andean; grain_type:Missing |
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Whole Genome Sequence (Short Read) |
HAWASSA_DUME |
|
population:Mesoamerican; grain_type:Red |
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Whole Genome Sequence (Short Read) |
GASILIDA |
|
population:Andean; grain_type:dark red kidney |
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Whole Genome Sequence (Short Read) |
G23939 Negro San Luis |
|
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Whole Genome Sequence (Short Read) |
G23587 |
|
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Whole Genome Sequence (Short Read) |
G23724 |
|
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Whole Genome Sequence (Short Read) |
G21245 |
|
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Whole Genome Sequence (Short Read) |
G23582 |
|
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Whole Genome Sequence (Short Read) |
wild |
|
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Whole Genome Sequence (Short Read) |
wild |
|
||||||
Whole Genome Sequence (Short Read) |
SCR 9 |
|
population:Mesoamerican; phenotype:Drought tolerance, BCMV (bc3) resistance |
|||||
Whole Genome Sequence (Short Read) |
SCR 2 |
|
population:Mesoamerican; phenotype:Drought tolerance, BCMV (bc3) resistance |
|||||
Whole Genome Sequence (Short Read) |
SXB 412 |
|
population:Mesoamerican; phenotype:Low soil fertility source, drought tolerance |
|||||
Whole Genome Sequence (Short Read) |
SEN 56 |
|
population:Mesoamerican; phenotype:Drought tolerance |
|||||
Whole Genome Sequence (Short Read) |
INB 827 |
|
population:Mesoamerican; phenotype:Drought tolerance |
|||||
Whole Genome Sequence (Short Read) |
ALB 213 |
|
population:Mesoamerican; phenotype:Drought and aluminium tolerance |
|||||
Whole Genome Sequence (Short Read) |
MIB 778 |
|
population:Mesoamerican; phenotype:High Fe seed content |
|||||
Whole Genome Sequence (Short Read) |
INB 841 |
|
population:Mesoamerican; phenotype:Drought tolerance |
|||||
Whole Genome Sequence (Short Read) |
race 3 |
|
race 3 pool |
|||||
Whole Genome Sequence (Short Read) |
race 3 |
|
race 3 pool |
|||||
Whole Genome Sequence (Short Read) |
race 6 |
|
race 6 pool |
|||||
Whole Genome Sequence (Short Read) |
race 2 |
|
race 2 pool |
|||||
Whole Genome Sequence (Short Read) |
race 2 |
|
race 2 pool |
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Whole Genome Sequence (Short Read) |
race 5 |
|
race 5 pool |
|||||
Whole Genome Sequence (Short Read) |
race 5 |
|
race 5 pool |
|||||
Whole Genome Sequence (Short Read) |
race 7 |
|
race 7 pool |
|||||
Whole Genome Sequence (Short Read) |
Wild Mesoamerican Population |
|
Wild Mesoamerican Population Pool |
|||||
Whole Genome Sequence (Short Read) |
Wild Andean Population |
|
Wild Andean Population Pool |
|||||
Whole Genome Sequence (Short Read) |
race 4 |
|
race 4 pool |
|||||
Whole Genome Sequence (Short Read) |
race 1 |
|
race 1 pool |
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Whole Genome Sequence (Short Read) |
race 1 |
|
race 1 pool |
|||||
Whole Genome Sequence (Short Read) |
BAT93 |
|
label:sample_BAT93 |
|||||
Whole Genome Sequence (Short Read) |
BAT93 |
|
label:sample_BAT93 |
|||||
Whole Genome Sequence (Short Read) |
BAT93 |
|
label:sample_S04_F9; genotype:BAT93xJalo F9 |
|||||
Whole Genome Sequence (Short Read) |
JaloEEP558 |
|
genotype:Jalo |
|||||
Whole Genome Sequence (Short Read) |
DAB64 |
|
||||||
Whole Genome Sequence (Short Read) |
CAL143 |
|
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Whole Genome Sequence (Short Read) |
ADP-65 |
|
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Whole Genome Sequence (Short Read) |
TARS-HT1 |
|
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Whole Genome Sequence (Short Read) |
Beniquez |
|
||||||
Whole Genome Sequence (Short Read) |
Verano |
|
||||||
Whole Genome Sequence (Short Read) |
G18996 |
|
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Whole Genome Sequence (Short Read) |
AC-Compass |
|
||||||
Whole Genome Sequence (Short Read) |
G5038 |
|
||||||
Whole Genome Sequence (Short Read) |
ADP-417 |
|
||||||
Whole Genome Sequence (Short Read) |
ADP-443 |
|
||||||
Whole Genome Sequence (Short Read) |
NUA184 |
|
||||||
Whole Genome Sequence (Short Read) |
DAB525 |
|
||||||
Whole Genome Sequence (Short Read) |
ALB288 |
|
||||||
Whole Genome Sequence (Short Read) |
OAC Rex |
|
||||||
Whole Genome Sequence (Short Read) |
OAC Rex |
|
||||||
Whole Genome Sequence (Short Read) |
OAC Rex |
|
||||||
Whole Genome Sequence (Short Read) |
Faba Andecha |
|
||||||
Whole Genome Sequence (Short Read) |
Peruvian G21244 |
|
||||||
Whole Genome Sequence (Short Read) |
Ayutla G12967 |
|
||||||
Whole Genome Sequence (Short Read) |
Chiapas G24594 |
|
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Whole Genome Sequence (Short Read) |
Chihuahua G23463 |
|
||||||
Whole Genome Sequence (Short Read) |
Durango G23556 |
|
||||||
Whole Genome Sequence (Short Read) |
Michoacan G24377 |
|
||||||
Whole Genome Sequence (Short Read) |
Sinaloa G23551 |
|
||||||
Whole Genome Sequence (Short Read) |
Arandas G23550 |
|
||||||
Whole Genome Sequence (Short Read) |
NY603_X Ten |
|
||||||
Whole Genome Sequence (Short Read) |
NY737_X Ten |
|
||||||
Whole Genome Sequence (Short Read) |
167_X Ten |
|
||||||
Whole Genome Sequence (Short Read) |
NY730_X Ten |
|
||||||
Whole Genome Sequence (Short Read) |
NY653 |
|
||||||
Whole Genome Sequence (Short Read) |
MAGIC population |
|
population:MAGIC |
|||||
Whole Genome Sequence (Short Read) |
Sanilac |
|
||||||
Whole Genome Sequence (Short Read) |
SARC1 |
|
||||||
Whole Genome Sequence (Short Read) |
SMARC1N-PN1 |
|
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Whole Genome Sequence (Short Read) |
SMARC1-PN1 |
|
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