Sequence Name:P.virgatum_v5
Assembly Name | P.virgatum_v5 | Biological Sample | AP13 |
Number of Sequences | 627 | Number of Chromosomes | 2n=4x=36,2n=6x=54,2n=8x=72 |
Total Length (bp) | 1,129,997,604 | N50 Length (bp) | 64,346,616 |
Number of Genes | 84,836 | Number of Genes Source File | GCF_016808335.1_P.virgatum_v5_protein.faa |
Number of Genes Annotated by Hayai-annotation | 0 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina, PACBIO | Read Depth | 177.12x(Illumina), 83.42x(PacBio) |
Assembly Method | MECAT | Estimated Genome Size (Mb) | 1,200 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | John T.Lovell(Jerry Jenkins Genome Sequencing Center), Thomas E.Juenger(University of Texas at Austin), Jeremy Schmutz(Genome Sequencing Center, HudsonAlpha Institute for Biotechnology; Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory) | Data Source | NCBI |
DOI/PMID | 10.1038/s41586-020-03127-1 | Data Source URL | https://www.ncbi.nlm.nih.gov/ |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:99.3%[S:13.3%,D:86.0%],F:0.4%,M:0.3%,n:1614 | BUSCO Gene (pep/cds) | C:99.8%[S:8.7%,D:91.1%],F:0.1%,M:0.1%,n:1614 |