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アセンブル , シーケンス , Assemble , Sequence , Fragaria x ananassa , Strawberry , イチゴ, オランダイチゴ

Fragaria x ananassa

Genome Assembly ID:t3747.G002

Sequence Name:Fragaria x ananassa Camarosa genome assembly v1.0

Details of the Assembled Genome Sequences

Assembly Name Fragaria x ananassa Camarosa genome assembly v1.0 Biological Sample cv. Camarosa
Number of Sequences 28 Number of Chromosomes 2n = 8x = 56
Total Length (bp) 805,488,706 N50 Length (bp) 27,809,139
Number of Genes 108,087 Number of Genes Source File Fxa_v1.2_makerStandard_proteins_woTposases_mod.fasta
Number of Genes Annotated by Hayai-annotation 108,087 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, 10X, PacBio Read Depth 615x
Assembly Method DenovoMAGIC3, HiRise pipeline, PBJelly Estimated Genome Size (Mb) 813
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Patrick P. Edger (Michigan State University), Steven J. Knapp (University of California_Davis) Data Source GDR: Genome Database For Rosaceae
DOI/PMID 10.1038/s41588-019-0356-4 Data Source URL
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:99.4%[S:4.2%,D:95.2%],F:0.2%,M:0.4%,n:1614 BUSCO Gene (pep/cds) C:97.4%[S:9.1%,D:88.3%],F:0.9%,M:1.7%,n:1614

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