Sequence Name:Fragaria x ananassa Camarosa genome assembly v1.0
Assembly Name | Fragaria x ananassa Camarosa genome assembly v1.0 | Biological Sample | cv. Camarosa |
Number of Sequences | 28 | Number of Chromosomes | 2n = 8x = 56 |
Total Length (bp) | 805,488,706 | N50 Length (bp) | 27,809,139 |
Number of Genes | 108,087 | Number of Genes Source File | Fxa_v1.2_makerStandard_proteins_woTposases_mod.fasta |
Number of Genes Annotated by Hayai-annotation | 108,087 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Illumina, 10X, PacBio | Read Depth | 615x |
Assembly Method | DenovoMAGIC3, HiRise pipeline, PBJelly | Estimated Genome Size (Mb) | 813 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Patrick P. Edger (Michigan State University), Steven J. Knapp (University of California_Davis) | Data Source | GDR: Genome Database For Rosaceae |
DOI/PMID | 10.1038/s41588-019-0356-4 | Data Source URL | https://www.rosaceae.org/ |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:99.4%[S:4.2%,D:95.2%],F:0.2%,M:0.4%,n:1614 | BUSCO Gene (pep/cds) | C:97.4%[S:9.1%,D:88.3%],F:0.9%,M:1.7%,n:1614 |