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アセンブル , シーケンス , Assemble , Sequence , Fragaria x ananassa , Strawberry , イチゴ, オランダイチゴ

Fragaria x ananassa

Genome Assembly ID:t3747.G001

Sequence Name:FANhybrid_r1.2

Details of the Assembled Genome Sequences

Sequence Name FANhybrid_r1.2 Biological Sample cv. Reikou
Number of Sequences 211,588 Number of Chromosomes 2n = 8x = 56
Total Length (bp) 173,229,572 N50 Length (bp) 5,137
Number of Genes 45,377 Number of Genes Source File FANhybrid_r1.2.pep
Number of Genes Annotated by Hayai-annotation 45,377 Hayai-Annotation Version zen_v2.0
Sequencing Method Illumina, 454 Read Depth 402.6x
Assembly Method Newbler 2.7, SOAPdenovo v1.05 Estimated Genome Size (Mb) 720
Sequencing Method Comments Comments
DOI/PMID 10.1093/dnares/dst049 Corresponding author Sachiko N. Isobe (Kazusa DNA Research Institute)
Data Source Strawberry GARDEN Data Source URL http://strawberry-garden.kazusa.or.jp/
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:68.6%[S:67.7%,D:0.9%],F:18.0%,M:13.4%,n:1614 BUSCO Gene (pep/cds) C:60.3%[S:58.9%,D:1.4%],F:22.2%,M:17.5%,n:1614

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