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アセンブル , シーケンス , Assemble , Sequence , Raphanus sativus , Japanese radish, Radish , ダイコン

Raphanus sativus

Genome Assembly ID:t3726.G002

Sequence Name:Rs1.0

Details of the Assembled Genome Sequences

Assembly Name Rs1.0 Biological Sample cv. WK10039
Number of Sequences 10,674 Number of Chromosomes 2n = 2x = 18
Total Length (bp) 426,202,302 N50 Length (bp) 38,354,807
Number of Genes 46,514 Number of Genes Source File Rs_1.0.peptide.fa
Number of Genes Annotated by Hayai-annotation 46,514 Hayai-Annotation Version zen_v2.0
Sequencing Method Sanger, Illumina, 454, SOLiD Read Depth 267x
Assembly Method Newbler v. 1.2.3 Estimated Genome Size (Mb) 538
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Hee-Ju Yu (The Catholic University of Korea) Data Source Radish Genome Database
DOI/PMID 10.1007/s13580-018-0079-y Data Source URL
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:97.9%[S:76.9%,D:21.0%],F:1.1%,M:1.0%,n:1614 BUSCO Gene (pep/cds) C:90.6%[S:69.5%,D:21.1%],F:1.7%,M:7.7%,n:1614

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