Sequence Name:RSA_r1.0
Assembly Name | RSA_r1.0 | Biological Sample | cv. Aokubi S-h |
Number of Sequences | 76,592 | Number of Chromosomes | 2n = 2x = 18 |
Total Length (bp) | 402,330,269 | N50 Length (bp) | 46,262 |
Number of Genes | 80,521 | Number of Genes Source File | RSA_r1.0_pep |
Number of Genes Annotated by Hayai-annotation | 80,521 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Sanger, Illumina, PacBio | Read Depth | 246.5x |
Assembly Method | SOAPdenovo2 r223 | Estimated Genome Size (Mb) | 538 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Takeshi Nishio (Graduate School of Agricultural Science, Tohoku University) | Data Source | Raphanus sativus_Genome DataBase |
DOI/PMID | 10.1093/dnares/dsu014 | Data Source URL | http://radish.kazusa.or.jp/ |
BUSCO Version | 5.1.0 | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:94.2%[S:82.3%,D:11.9%],F:4.0%,M:1.8%,n:1614 | BUSCO Gene (pep/cds) | C:89.5%[S:79.0%,D:10.5%],F:4.6%,M:5.9%,n:1614 |