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アセンブル , シーケンス , Assemble , Sequence , Raphanus sativus , Japanese radish, Radish , ダイコン

Raphanus sativus

Genome Assembly ID:t3726.G001

Sequence Name:RSA_r1.0

Details of the Assembled Genome Sequences

Assembly Name RSA_r1.0 Biological Sample cv. Aokubi S-h
Number of Sequences 76,592 Number of Chromosomes 2n = 2x = 18
Total Length (bp) 402,330,269 N50 Length (bp) 46,262
Number of Genes 80,521 Number of Genes Source File RSA_r1.0_pep
Number of Genes Annotated by Hayai-annotation 80,521 Hayai-Annotation Version zen_v2.0
Sequencing Method Sanger, Illumina, PacBio Read Depth 246.5x
Assembly Method SOAPdenovo2 r223 Estimated Genome Size (Mb) 538
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Takeshi Nishio (Graduate School of Agricultural Science, Tohoku University) Data Source Raphanus sativus_Genome DataBase
DOI/PMID 10.1093/dnares/dsu014 Data Source URL
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:94.2%[S:82.3%,D:11.9%],F:4.0%,M:1.8%,n:1614 BUSCO Gene (pep/cds) C:89.5%[S:79.0%,D:10.5%],F:4.6%,M:5.9%,n:1614

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