Sequence Name:brapa_z1_v2
Assembly Name | brapa_z1_v2 | Biological Sample | ssp. trilocularis, A doubled haploid line Z1, Yellow sarson |
Number of Sequences | 210 | Number of Chromosomes | 2n = 2x = 20 |
Total Length (bp) | 443,953,949 | N50 Length (bp) | 39,217,719 |
Number of Genes | 52,701 | Number of Genes Source File | GCA_900412535.3_brapa_z1_v2_protein.faa.gz |
Number of Genes Annotated by Hayai-annotation | 52,701 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | Oxford Nanopore, Bionano Optical Mapping, Omni-C | Read Depth | 186x |
Assembly Method | Smartdenovo, Wtdbg2/Redbean, Flye v2.8.3, Necat, bionano solve and tools v1.6.1, 3D-DNA v180419 | Estimated Genome Size (Mb) | NA |
Sequencing Method Comments | NA | Comments | Yellow sarson, A doubled haploid line |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Jean-Marc Aury (Paris-Saclay University) | Data Source | NCBI |
DOI/PMID | 10.3390/biology10080732 | Data Source URL | https://www.ncbi.nlm.nih.gov/ |
BUSCO Version | BUSCO Dataset | ||
BUSCO Genome | BUSCO Gene (pep/cds) |