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アセンブル , シーケンス , Assemble , Sequence , Brassica rapa subsp. trilocularis , Yellow sarson , ヒノナ, イエローサルソン

Brassica rapa

Genome Assembly ID:t3711.G008

Sequence Name:brapa_z1_v2

Details of the Assembled Genome Sequences

Assembly Name brapa_z1_v2 Biological Sample ssp. trilocularis, A doubled haploid line Z1, Yellow sarson
Number of Sequences 210 Number of Chromosomes 2n = 2x = 20
Total Length (bp) 443,953,949 N50 Length (bp) 39,217,719
Number of Genes 52,701 Number of Genes Source File GCA_900412535.3_brapa_z1_v2_protein.faa.gz
Number of Genes Annotated by Hayai-annotation 0 Hayai-Annotation Version zen_v2.0
Sequencing Method Oxford Nanopore, Bionano Optical Mapping, Omni-C Read Depth 186x
Assembly Method Smartdenovo, Wtdbg2/Redbean, Flye v2.8.3, Necat, bionano solve and tools v1.6.1, 3D-DNA v180419 Estimated Genome Size (Mb) NA
Sequencing Method Comments NA Comments Yellow sarson, A doubled haploid line
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Jean-Marc Aury (Paris-Saclay University) Data Source NCBI
DOI/PMID 10.3390/biology10080732 Data Source URL https://www.ncbi.nlm.nih.gov/
BUSCO Version BUSCO Dataset
BUSCO Genome BUSCO Gene (pep/cds)

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