Sequence Name:brapa_z1_v2
| Assembly Name | brapa_z1_v2 | Biological Sample | ssp. trilocularis, A doubled haploid line Z1, Yellow sarson |
| Number of Sequences | 210 | Number of Chromosomes | 2n = 2x = 20 |
| Total Length (bp) | 443,953,949 | N50 Length (bp) | 39,217,719 |
| Number of Genes | 52,701 | Number of Genes Source File | GCA_900412535.3_brapa_z1_v2_protein.faa.gz |
| Number of Genes Annotated by Hayai-annotation | 52,701 | Hayai-Annotation Version | zen_v2.0 |
| Sequencing Method | Oxford Nanopore, Bionano Optical Mapping, Omni-C | Read Depth | 186x |
| Assembly Method | Smartdenovo, Wtdbg2/Redbean, Flye v2.8.3, Necat, bionano solve and tools v1.6.1, 3D-DNA v180419 | Estimated Genome Size (Mb) | NA |
| Sequencing Method Comments | NA | Comments | Yellow sarson, A doubled haploid line |
| Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
| Corresponding author | Jean-Marc Aury (Paris-Saclay University) | Data Source | NCBI |
| DOI/PMID | 10.3390/biology10080732 | Data Source URL | https://www.ncbi.nlm.nih.gov/ |
| BUSCO Version | 5.8.2 | BUSCO Dataset | embryophyta_odb10 |
| BUSCO Genome | C:99.6%[S:84.0%,D:15.6%],F:0.1%,M:0.3%,n:1614 | BUSCO Gene (pep/cds) | C:97.5%[S:83.1%,D:14.4%],F:1.0%,M:1.5%,n:1614 |