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アセンブル , シーケンス , Assemble , Sequence , Brassica rapa subsp. trilocularis , Yellow sarson , ヒノナ, イエローサルソン

Brassica rapa

Genome Assembly ID:t3711.G002

Sequence Name:BrapaZ1

Details of the Assembled Genome Sequences

Assembly Name BrapaZ1 Biological Sample ssp. trilocularis, A doubled haploid line Z1, Yellow sarson
Number of Sequences 304 Number of Chromosomes 2n = 2x = 20
Total Length (bp) 401,926,910 N50 Length (bp) 34,481,995
Number of Genes 46,721 Number of Genes Source File BrapaZ1_proteins.fasta
Number of Genes Annotated by Hayai-annotation 46,721 Hayai-Annotation Version zen_v2.0
Sequencing Method Nanopore Read Depth NA
Assembly Method BioNano optical map Estimated Genome Size (Mb) NA
Sequencing Method Comments NA Comments Yellow sarson, A doubled haploid line
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Jean-Marc Aury(Universite Paris-Saclay) Data Source Chromosome-scale assemblies of plant genomes
DOI/PMID 10.1038/s41477-018-0289-4 Data Source URL http://www.genoscope.cns.fr/externe/plants
BUSCO Version 5.1.0 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:99.2%[S:84.6%,D:14.6%],F:0.3%,M:0.5%,n:1614 BUSCO Gene (pep/cds) C:96.2%[S:82.8%,D:13.4%],F:1.2%,M:2.6%,n:1614

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