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Brassica rapa

Assembly Name:Brapa_sequence_v3.0

Gene File:Brapa_genome_v3.0_pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
BraA05g039740.3C
PEP
BraA05g039740.3C
Position on the Genome Chromosome A05
Start Position 27071865
End Position 27074020
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00128744
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
ATPase, AAA-type, conserved site
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
AAA domain-containing protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00004,PF16450,PF17862
Pfam Description Details
InterPro ID
IPR041569,IPR003959,IPR032501,IPR005937,IPR003593,IPR027417,IPR003960
InterPro Description Details
GO ID
GO:0016887,GO:0005524,GO:0000502,GO:0030163,GO:0005737,GO:0005634
GO Description Details
GOslim ID
GO:0019538,GO:0005737,GO:0000166,GO:0016787,GO:0005634,GO:0009057,GO:0000502,GO:0043167
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Brassica cretica
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. pekinensis, inbred line Chiifu-401-42, Chinese cabbage , Brassicaceae , アブラナ科 , Brassica , アブラナ属 , Chinese cabbage, Turnip, Yellow sarson, Purple-stem mustard, Pac-choy, Bok-choy, Birdsrape mustard, Field mustard , アブラナ, 在来ナタネ, ハクサイ, カブ, イエローサルソン, コウサイタイ, タイサイ, チンゲンサイ, アブラナ (oleifera亜種), アブラナ (campestris亜種) Chinese cabbage , ハクサイ (pekinensis亜種)

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.