Brassica rapaAssembly Name:Brapa_sequence_v3.0
Gene File:Brapa_genome_v3.0_pep.fasta.gz
| Position on the Genome | Gene Name | CDS | BraA03g023790.3C |
| PEP | BraA03g023790.3C |
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| Position on the Genome | Chromosome | A03 | |
| Start Position | 11418754 | ||
| End Position | 11421140 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KPRO00215860 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Transcription factor, MADS-box |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | refseq |
|
| Protein name | MADS-box protein SOC1-like isoform X1 |
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| Accession | |||
| CrossRef Refseq from UniProt | NA |
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| EC | NA |
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| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF00319,PF01486 |
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| Pfam Description | Details | ||
| InterPro ID | IPR002100,IPR002487 |
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| InterPro Description | Details | ||
| GO ID | GO:0006355,GO:0005634,GO:0046983,GO:0003677,GO:0003700 |
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| GO Description | Details | ||
| GOslim ID | GO:0005515,GO:0050789,GO:0003676,GO:0006351,GO:0005634,GO:0065009 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | |||
| TF family Description | MIKC_MADS family protein |
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| Best hit taxonomy | Species | Brassica napus | |
| Family | Brassicaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
