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Brassica rapa

Assembly Name:Brapa_sequence_v3.0

Gene File:Brapa_genome_v3.0_pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
BraA03g021530.3C
PEP
BraA03g021530.3C
Position on the Genome Chromosome A03
Start Position 10288777
End Position 10290253
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00180046
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Expansin
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Expansin
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF03330,PF01357
Pfam Description Details
InterPro ID
IPR036749,IPR007112,IPR007117,IPR036908,IPR002963,IPR009009,IPR007118
InterPro Description Details
GO ID
GO:0005618,GO:0016020,GO:0005576,GO:0009664
GO Description Details
GOslim ID
GO:0005576,GO:0016020,GO:0005618,GO:0071555
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Brassica rapa subsp. pekinensis
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. pekinensis, inbred line Chiifu-401-42, Chinese cabbage , Brassicaceae , アブラナ科 , Brassica , アブラナ属 , Chinese cabbage, Turnip, Yellow sarson, Purple-stem mustard, Pac-choy, Bok-choy, Birdsrape mustard, Field mustard , アブラナ, 在来ナタネ, ハクサイ, カブ, イエローサルソン, コウサイタイ, タイサイ, チンゲンサイ, アブラナ (oleifera亜種), アブラナ (campestris亜種) Chinese cabbage , ハクサイ (pekinensis亜種)

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.