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Brassica rapa

Assembly Name:Brapa_sequence_v3.0

Gene File:Brapa_genome_v3.0_pep.fasta.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
BraA01g042910.3C
PEP
BraA01g042910.3C
Position on the Genome Chromosome A01
Start Position 28572228
End Position 28573636
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI04410024
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
40S ribosomal protein S3a
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
40S ribosomal protein S3a
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF01015
Pfam Description Details
InterPro ID
IPR027500,IPR001593,IPR018281
InterPro Description Details
GO ID
GO:0006412,GO:0022627,GO:0005829,GO:0003735
GO Description Details
GOslim ID
GO:0005737,GO:0015935,GO:0005198,GO:0005840
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Brassica napus
Family Brassicaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. pekinensis, inbred line Chiifu-401-42, Chinese cabbage , Brassicaceae , アブラナ科 , Brassica , アブラナ属 , Chinese cabbage, Turnip, Yellow sarson, Purple-stem mustard, Pac-choy, Bok-choy, Birdsrape mustard, Field mustard , アブラナ, 在来ナタネ, ハクサイ, カブ, イエローサルソン, コウサイタイ, タイサイ, チンゲンサイ, アブラナ (oleifera亜種), アブラナ (campestris亜種) Chinese cabbage , ハクサイ (pekinensis亜種)

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.